Virus Biophysics   ->    Mariano Dellarole- PhD - Publications

Glycan-Glycan Interaction Determines Shigella Tropism toward Human T Lymphocytes.

Belotserkovsky I, Brunner K, Pinaud L, Rouvinski A, Dellarole M, Baron B, Dubey G, Samassa F, Parsot C, Sansonetti P, Phalipon A.

mBio. 2018 Feb 13;9(1). pii: e02309-17. doi: 10.1128/mBio.02309-17.

2.

The bright and the dark side of human antibody responses to flaviviruses: lessons for vaccine design.

Rey FA, Stiasny K, Vaney MC, Dellarole M, Heinz FX.

EMBO Rep. 2018 Feb;19(2):206-224. doi: 10.15252/embr.201745302. Epub 2017 Dec 27. Review.

3.

High-Resolution Mapping of a Repeat Protein Folding Free Energy Landscape.

Fossat MJ, Dao TP, Jenkins K, Dellarole M, Yang Y, McCallum SA, Garcia AE, Barrick D, Roumestand C, Royer CA.

Biophys J. 2016 Dec 6;111(11):2368-2376. doi: 10.1016/j.bpj.2016.08.027.

4.

Unusual Reversible Oligomerization of Unfolded Dengue Envelope Protein Domain 3 at High Temperatures and Its Abolition by a Point Mutation.

Saotome T, Nakamura S, Islam MM, Nakazawa A, Dellarole M, Arisaka F, Kidokoro S, Kuroda Y.

Biochemistry. 2016 Aug 16;55(32):4469-75. doi: 10.1021/acs.biochem.6b00431. Epub 2016 Aug 4.

PMID:
27433922
5.

Exploring the Protein Folding Pathway with High-Pressure NMR: Steady-State and Kinetics Studies.

Roche J, Dellarole M, Royer CA, Roumestand C.

Subcell Biochem. 2015;72:261-78. doi: 10.1007/978-94-017-9918-8_13. Review.

PMID:
26174386
6.

Evolutionarily Conserved Pattern of Interactions in a Protein Revealed by Local Thermal Expansion Properties.

Dellarole M, Caro JA, Roche J, Fossat M, Barthe P, García-Moreno E B, Royer CA, Roumestand C.

J Am Chem Soc. 2015 Jul 29;137(29):9354-62. doi: 10.1021/jacs.5b04320. Epub 2015 Jul 16.

PMID:
26135981
7.

Molecular basis for bacterial peptidoglycan recognition by LysM domains.

Mesnage S, Dellarole M, Baxter NJ, Rouget JB, Dimitrov JD, Wang N, Fujimoto Y, Hounslow AM, Lacroix-Desmazes S, Fukase K, Foster SJ, Williamson MP.

Nat Commun. 2014 Jun 30;5:4269. doi: 10.1038/ncomms5269.

8.

Measuring residual dipolar couplings at high hydrostatic pressure: robustness of alignment media to high pressure.

Sibille N, Dellarole M, Royer C, Roumestand C.

J Biomol NMR. 2014 Jan;58(1):9-16. doi: 10.1007/s10858-013-9798-7. Epub 2013 Dec 1.

PMID:
24292655
9.

High-pressure fluorescence applications.

Dellarole M, Royer CA.

Methods Mol Biol. 2014;1076:53-74. doi: 10.1007/978-1-62703-649-8_4.

PMID:
24108623
10.

Effect of internal cavities on folding rates and routes revealed by real-time pressure-jump NMR spectroscopy.

Roche J, Dellarole M, Caro JA, Norberto DR, Garcia AE, Garcia-Moreno B, Roumestand C, Royer CA.

J Am Chem Soc. 2013 Oct 2;135(39):14610-8. doi: 10.1021/ja406682e. Epub 2013 Sep 18.

PMID:
23987660
11.

Low-cost equilibrium unfolding of heme proteins using 2 μl samples.

Guca E, Roumestand C, Vallone B, Royer CA, Dellarole M.

Anal Biochem. 2013 Dec 1;443(1):13-5. doi: 10.1016/j.ab.2013.08.006. Epub 2013 Aug 16.

PMID:
23958270
12.

Probing the physical determinants of thermal expansion of folded proteins.

Dellarole M, Kobayashi K, Rouget JB, Caro JA, Roche J, Islam MM, Garcia-Moreno E B, Kuroda Y, Royer CA.

J Phys Chem B. 2013 Oct 24;117(42):12742-9. doi: 10.1021/jp401113p. Epub 2013 May 21.

PMID:
23646824
13.

Volumetric properties underlying ligand binding in a monomeric hemoglobin: a high-pressure NMR study.

Dellarole M, Roumestand C, Royer C, Lecomte JT.

Biochim Biophys Acta. 2013 Sep;1834(9):1910-22. doi: 10.1016/j.bbapap.2013.04.016. Epub 2013 Apr 22.

PMID:
23619242
14.

Structural, energetic, and dynamic responses of the native state ensemble of staphylococcal nuclease to cavity-creating mutations.

Roche J, Caro JA, Dellarole M, Guca E, Royer CA, García-Moreno BE, Garcia AE, Roumestand C.

Proteins. 2013 Jun;81(6):1069-80. doi: 10.1002/prot.24231. Epub 2013 Apr 27.

PMID:
23239146
15.

Remodeling of the folding free energy landscape of staphylococcal nuclease by cavity-creating mutations.

Roche J, Dellarole M, Caro JA, Guca E, Norberto DR, Yang Y, Garcia AE, Roumestand C, García-Moreno B, Royer CA.

Biochemistry. 2012 Nov 27;51(47):9535-46. doi: 10.1021/bi301071z. Epub 2012 Nov 13.

PMID:
23116341
16.

Thermodynamics of cooperative DNA recognition at a replication origin and transcription regulatory site.

Dellarole M, Sánchez IE, de Prat Gay G.

Biochemistry. 2010 Dec 7;49(48):10277-86. doi: 10.1021/bi1014908. Epub 2010 Nov 10.

17.

Experimental snapshots of a protein-DNA binding landscape.

Sánchez IE, Ferreiro DU, Dellarole M, de Prat-Gay G.

Proc Natl Acad Sci U S A. 2010 Apr 27;107(17):7751-6. doi: 10.1073/pnas.0911734107. Epub 2010 Apr 7.

18.

The human papillomavirus E7-E2 interaction mechanism in vitro reveals a finely tuned system for modulating available E7 and E2 proteins.

Smal C, Wetzler DE, Dantur KI, Chemes LB, Garcia-Alai MM, Dellarole M, Alonso LG, Gaston K, de Prat-Gay G.

Biochemistry. 2009 Dec 22;48(50):11939-49. doi: 10.1021/bi901415k.

PMID:
19899811
19.

Indirect DNA readout on the protein side: coupling between histidine protonation, global structural cooperativity, dynamics, and DNA binding of the human papillomavirus type 16 E2C domain.

Eliseo T, Sánchez IE, Nadra AD, Dellarole M, Paci M, de Prat Gay G, Cicero DO.

J Mol Biol. 2009 May 1;388(2):327-44. doi: 10.1016/j.jmb.2009.03.013. Epub 2009 Mar 12.

PMID:
19285507
20.

Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics.

Sánchez IE, Dellarole M, Gaston K, de Prat Gay G.

Nucleic Acids Res. 2008 Feb;36(3):756-69. Epub 2007 Dec 15.

21.
22.

Structural and thermodynamic basis for the enhanced transcriptional control by the human papillomavirus strain-16 E2 protein.

Cicero DO, Nadra AD, Eliseo T, Dellarole M, Paci M, de Prat-Gay G.

Biochemistry. 2006 May 30;45(21):6551-60.

PMID:
16716065
23.

Free energy contributions to direct readout of a DNA sequence.

Ferreiro DU, Dellarole M, Nadra AD, de Prat-Gay G.

J Biol Chem. 2005 Sep 16;280(37):32480-4. Epub 2005 Jul 5.